Welcome to lnifmri_prep documentation

This document will guide you through the necessary steps to configure and run a complete preprocessing workflow for structural and functional MRI data.

• LNiF MRI Preprocessing Workflow
  • Quick overview
  • Limitations
• System Requirements
  • Operating system
  • Software dependencies
  • Computing resources
• Package Setup
  • Additional steps for macOS users
• Workflow Setup
  • Setup the environment
  • Launch lnifmri_prep
  • Check progress
• Output
  • Subject-specific output
    • Structural data
    • Functional data
    • SDC data
  • Global output